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Agenda:120615

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Agenda:

1. Information Items

2. Update on mouse marker paper (John Stamatoyannopoulos)

3. DCC Update (http://genomewiki.ucsc.edu/EncodeDCC/index.php/2012-06-15_DCC_Progress#Mouse_ENCODE)

4. Presentation by Weisheng Wu (Ross Hardison Lab) on chromatin state analysis; ChromatinStatesOnGenesAndRTbounds.pdf

5. Comparison of Replication Timing boundaries (TTR) with Topological Domain boundaries (Feng Yue)

6. Motif analysis (Michael Beer)

7. Integrative Analysis Paper outline Discussion (If time permits)