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Pseudogene Subgroup Conference Calls

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Meeting Minutes

Jun. 19 2008 minutes (mini meeting at ENCODE meeting)

Conference Call Minutes

Feb. 11 2008 minutes

Feb. 25 2008 minutes

Apr. 14 2008 minutes

Jul. 17 2008 minutes

Sep. 11 2008 minutes

Nov. 25 2008 minutes

Dec. 09 2008 minutes

Feb. 05 2009 minutes

Feb. 19 2009 minutes

Mar. 12 2009 minutes

Apr. 23 2009 minutes

Jun. 12 2009 minutes

Jul. 2 2009 minutes

Aug. 18 2009 minutes

Sep. 8 2009 minutes

Nov. 5 2009 minutes

Nov. 29 2010 minutes

Apr. 8 2011 minutes

Jul. 5 2011 minutes

Jul. 20 2011 minutes

Aug. 4 2011 minutes

Aug. 11 2011 minutes

Aug. 15 2011 minutes

Aug. 25 2011 minutes

Sep. 16 2011 minutes

Sep. 27 2011 minutes

Oct. 17 2011 minutes

Oct. 17 2011 minutes

Oct. 26 2011 minutes

Nov. 8 2011 minutes

Nov. 14 2011 minutes

Dec. 5 2011 minutes

Dec. 9 2011 minutes

Conference Call Presentations

Jun. 05 2008 Presentation: HAVANA Pseudogene annotation and VNR pseudogenes - Adam Frankish, HAVANA.

Jun. 05 2008 Presentation: SerpinB11 polymorphic pseudogene - Adam Frankish, HAVANA.

Sep. 11 2008 Presentation: Unitary Pseudogenes - Adam Frankish, HAVANA.

Nov. 25 2008 Presentation: Unitary pseudogenes presentation - Adam Frankish, HAVANA.

Nov. 25 2008 Notes: Unitary pseudogene comparison - Adam Frankish, HAVANA.

Nov. 25 2008 Presentation: Pseudogene Overlaps (Yale/HAVANA/UCSC) - Philip Cayting, Yale.

Dec. 09 2008 Presentation: Unitary pseudogenes in gene clusters - Adam Frankish, HAVANA.

Feb. 05 2009 Presentation: Pseudogene ontology terms - Philip Cayting, Yale.

Feb. 19 2009 Presentation: Ribosomal pseudogene conservation (RPL39) - Yale.

Feb. 19 2009 Presentation: Processed Pseudogenes - Adam Frankish, HAVANA.

Feb. 25 2009 Document: Pseudogenes Revised Deliverables - Mark Gerstein, Yale.

Mar. 12 2009 Presentation: Segregating Pseudogenes - Adam Frankish, HAVANA.

Mar. 12 2009 Presentation: Nonsense SNPs - Suganthi Balasubramanian, Yale.

Mar. 12 2009 Presentation: Removed Polymorphic Pseudogenes - Zhengdong Zhang, Yale.

Apr. 23 2009 Presentation: Ribosomal Protein Pseudogenes - Adam Frankish, HAVANA (presentation created by Jessica Vamathevan).

Apr. 23 2009 Notes: Ribosomal Protein Pseudogenes Annotation - Adam Frankish, HAVANA.

Jun. 12 2009 Notes: Pseudogene Ontology - Adam Frankish, HAVANA.

Jul. 21 2009 Presentation: Transcribed Pseudogenes - Mark Gerstein (for Lukas Habegger), Yale.

Aug. 18 2009 Presentation: Pseudogenes in Segmental Duplications - Toby Hunt, HAVANA.

Sep. 8 2009 Notes: Pseudogenes in the UCSC Genome Browser - Rachel Harte, UCSC

Nov. 5 2009 Presentation: Gene or pseudogene? - Suganthi Balasubramanian, Yale.

Nov. 5 2009 Presentation: Mitochondrial Pseudogenes - Adam Frankish, HAVANA.

Nov. 5 2009 Presentation: Gencode Pseudogene Annotations - Philip Cayting, Yale.

Nov. 29 2010 Presentation: Rotation Research Update (Search for miRNA Target Sites on Pseudogenes) - Xiu Huang, Yale.

Nov. 29 2010 Presentation: Transcribed Pseudogenes - Lukas Habegger, Yale.

Apr. 8 2011 Presentation: Peptide Mapping to Pseudogenes - Baikang Pei, Yale.

Jul. 5 2011 Presentation: Chromatin State and Conservation of Pseudogenes from the GENCODE Annotation - Baikang Pei, Yale.

Jul. 5 2011 Presentation: Chromatin & Pseudogenes - Cristina Sisu, Yale.

Jul. 20 2011 Presentation: Pseudogene Sequence Preservation - Baikang Pei, Yale.

Jul. 20 2011 Document: Pseudogene Companion Paper Outline - Yale.

Jul. 20 2011 Presentation: Idea of Figures for the Pseudogene Companion Paper - Baikang Pei, Yale.

Aug. 4 2011 Presentation: A few bits and pieces - Adam Frankish, Sanger.

Aug. 4 2011 Presentation: Pseudogenes Examples From Past Calls - Rachel Harte, UCSC

Aug. 11 2011 Presentation: Pseudogene/CDS overlaps - Adam Frankish, Sanger.

Aug. 11 2011 Presentation: Pseudogenes Overlapping Gencode Coding Transcripts - Rachel Harte, UCSC

Aug. 15 2011 Presentation: TFBS of Pseudogenes - Baikang Pei, Yale.

Sep. 27 2011 Presentation: Experimental validation progress report - Cedric Howald, Lausanne

Oct. 6 2011 Presentation: Figures for Pseudogenes Companion Paper - Baikang Pei, Yale.

Oct. 17 2011 Presentation: Experimental validation progress report - an update - Cedric Howald, Lausanne

Dec. 9 2011 Presentation: Experimental validation progress report - second round (slide 22 onwards) - Cedric Howald, Lausanne

Dec. 9 2011 Presentation: Figures for Pseudogene Companion Paper - Baikang Pei, Yale

Meeting WebEx Recordings

To download the WebEx Player for the .arf files (for mac) click here‎

10th February 2011

8th April 2011

5th July 2011

20th July 2011‎

11th August 2011‎